Pubblicazioni

Pubblicazioni

  1. De Paolis V, Lorefice E, Orecchini E, Carissimi C, Laudadio I, Fulci V. Epitranscriptomics: A New Layer of microRNA Regulation in Cancer. Cancers (Basel). 2021 Jul 5;13(13):3372. doi: 10.3390/cancers13133372.

  2. Fulci V, Carissimi C, Laudadio I. COVID-19 and Preparing for Future Ecological Crises: Hopes from Metagenomics in Facing Current and Future Viral Pandemic Challenges. OMICS. 2021 Jun;25(6):336-341. doi: 10.1089/omi.2021.0058.

  3. Carissimi C, Laudadio I, Lorefice E, Azzalin G, De Paolis V, Fulci V. Bisulphite miRNA-seq reveals widespread CpG and non-CpG 5-(hydroxy)methyl-Cytosine in human microRNAs. RNA Biol. 2021 Dec;18(12):2226-2235. doi:10.1080/15476286.2021.1927423.

  4. Fulci V, Stronati L, Cucchiara S, Laudadio I, Carissimi C. Emerging Roles of Gut Virome in Pediatric Diseases. Int J Mol Sci. 2021 Apr 16;22(8):4127. doi:10.3390/ijms22084127.

  5. Oliva S, Laudadio I, Fulci V, Rossetti D, Isoldi S, Stronati L, Carissimi C. SERPINB12 as a possible marker of steroid dependency in children with eosinophilic esophagitis: A pilot study. Dig Liver Dis. 2020 Feb;52(2):158-163. doi: 10.1016/j.dld.2019.08.018.

  6. Carissimi C, Laudadio I, Palone F, Fulci V, Cesi V, Cardona F, Alfonsi C, Cucchiara S, Isoldi S, Stronati L. Functional analysis of gut microbiota and immunoinflammation in children with autism spectrum disorders. Dig Liver Dis. 2019 Oct;51(10):1366-1374. doi: 10.1016/j.dld.2019.06.006.

  7. Laudadio I, Fulci V, Stronati L, Carissimi C. Next-Generation Metagenomics: Methodological Challenges and Opportunities. OMICS. 2019 Jul;23(7):327-333. doi:10.1089/omi.2019.0073.

  8. Laudadio I, Carissimi C, Fulci V. How RNAi machinery enters the world of telomerase. Cell Cycle. 2019 May;18(10):1056-1067. doi:10.1080/15384101.2019.1609834.

  9. Laudadio I, Orso F, Azzalin G, Calabrò C, Berardinelli F, Coluzzi E, Gioiosa S, Taverna D, Sgura A, Carissimi C, Fulci V. AGO2 promotes telomerase activity and interaction between the telomerase components TERT and TERC. EMBO Rep. 2019 Feb;20(2):e45969. doi: 10.15252/embr.201845969.

  10. Laudadio I, Formichetti S, Gioiosa S, Klironomos F, Rajewsky N, Macino G, Carissimi C, Fulci V. Characterization of Transcription Termination-Associated RNAs: New Insights into their Biogenesis, Tailing, and Expression in Primary Tumors. Int J Genomics. 2018 Apr 26;2018:1243858. doi: 10.1155/2018/1243858.

  11. Laudadio I, Fulci V, Palone F, Stronati L, Cucchiara S, Carissimi C. Quantitative Assessment of Shotgun Metagenomics and 16S rDNA Amplicon Sequencing in the Study of Human Gut Microbiome. OMICS. 2018 Apr;22(4):248-254. doi: 10.1089/omi.2018.0013.

  12. Gioiosa S, Verduci L, Azzalin G, Carissimi C, Fulci V, Macino G. Microarraydataset of Jurkat cells following miR-93 over-expression. Data Brief. 2016 Jun 20;8:575-8. doi: 10.1016/j.dib.2016.06.001.

  13. Carissimi C, Colombo T, Azzalin G, Cipolletta E, Laudadio I, Macino G, Fulci V. Comprehensive RNA dataset of AGO2 associated RNAs in Jurkat cells following miR-21 over-expression. Data Brief. 2016 Feb 24;7:604-6. doi:10.1016/j.dib.2016.02.041.

  14. Krell J, Stebbing J, Carissimi C, Dabrowska AF, de Giorgio A, Frampton AE, Harding V, Fulci V, Macino G, Colombo T, Castellano L. TP53 regulates miRNA association with AGO2 to remodel the miRNA-mRNA interaction network. Genome Res. 2016 Mar;26(3):331-41. doi: 10.1101/gr.191759.115.

  15. Verduci L, Azzalin G, Gioiosa S, Carissimi C, Laudadio I, Fulci V, Macino G. microRNA-181a enhances cell proliferation in acute lymphoblastic leukemia by targeting EGR1. Leuk Res. 2015 Apr;39(4):479-85. doi:10.1016/j.leukres.2015.01.010.

  16. Tavolaro S, Colombo T, Chiaretti S, Peragine N, Fulci V, Ricciardi MR, Messina M, Bonina S, Brugnoletti F, Marinelli M, Di Maio V, Mauro FR, Del Giudice I, Macino G, Foà R, Guarini A. Increased chronic lymphocytic leukemia proliferation upon IgM stimulation is sustained by the upregulation of miR-132 and miR-212. Genes Chromosomes Cancer. 2015 Apr;54(4):222-34. doi: 10.1002/gcc.22236.

  17. Carissimi C, Laudadio I, Cipolletta E, Gioiosa S, Mihailovich M, Bonaldi T, Macino G, Fulci V. ARGONAUTE2 cooperates with SWI/SNF complex to determine nucleosome occupancy at human Transcription Start Sites. Nucleic Acids Res. 2015 Feb 18;43(3):1498-512. doi: 10.1093/nar/gku1387. Epub 2015 Jan 20.

  18. Carissimi C, Carucci N, Colombo T, Piconese S, Azzalin G, Cipolletta E, Citarella F, Barnaba V, Macino G, Fulci V. miR-21 is a negative modulator of T-cell activation. Biochimie. 2014 Dec;107 Pt B:319-26. doi: 10.1016/j.biochi.2014.09.021.

  19. Montalban E, Mattugini N, Ciarapica R, Provenzano C, Savino M, Scagnoli F, Prosperini G, Carissimi C, Fulci V, Matrone C, Calissano P, Nasi S. MiR-21 is an Ngf-modulated microRNA that supports Ngf signaling and regulates neuronal degeneration in PC12 cells. Neuromolecular Med. 2014 Jun;16(2):415-30. doi:10.1007/s12017-014-8292-z.

  20. Frampton AE, Castellano L, Colombo T, Giovannetti E, Krell J, Jacob J, Pellegrino L, Roca-Alonso L, Funel N, Gall TM, De Giorgio A, Pinho FG, Fulci V, Britton DJ, Ahmad R, Habib NA, Coombes RC, Harding V, Knösel T, Stebbing J, Jiao LR. MicroRNAs cooperatively inhibit a network of tumor suppressor genes to promote pancreatic tumor growth and progression. Gastroenterology. 2014 Jan;146(1):268-77.e18. doi: 10.1053/j.gastro.2013.10.010.

  21. Lucherini OM, Obici L, Ferracin M, Fulci V, McDermott MF, Merlini G, Muscari I, Magnotti F, Dickie LJ, Galeazzi M, Negrini M, Baldari CT, Cimaz R, Cantarini L. First report of circulating microRNAs in tumour necrosis factor receptor-associated periodic syndrome (TRAPS). PLoS One. 2013 Sep 16;8(9):e73443. doi: 10.1371/journal.pone.0073443. P

  22. Sebastiani GD, Fulci V, Niccolini S, Giannitti C, Bugatti S, Minisola G, Barnaba V, Scappucci G, Macino G, Galeazzi M. Over-expression of miR-223 in T-lymphocytes of early rheumatoid arthritis patients. Clin Exp Rheumatol. 2011 Nov-Dec;29(6):1058-9.

  23. Cocco E, Paladini F, Macino G, Fulci V, Fiorillo MT, Sorrentino R. The expression of vasoactive intestinal peptide receptor 1 is negatively modulated by microRNA 525-5p. PLoS One. 2010 Aug 10;5(8):e12067. doi:10.1371/journal.pone.0012067.

  24. Curtale G, Citarella F, Carissimi C, Goldoni M, Carucci N, Fulci V, Franceschini D, Meloni F, Barnaba V, Macino G. An emerging player in the adaptive immune response: microRNA-146a is a modulator of IL-2 expression and activation-induced cell death in T lymphocytes. Blood. 2010 Jan 14;115(2):265-73. doi: 10.1182/blood-2009-06-225987.

  25. Fulci V, Scappucci G, Sebastiani GD, Giannitti C, Franceschini D, Meloni F, Colombo T, Citarella F, Barnaba V, Minisola G, Galeazzi M, Macino G. miR-223 is overexpressed in T-lymphocytes of patients affected by rheumatoid arthritis. Hum Immunol. 2010 Feb;71(2):206-11. doi: 10.1016/j.humimm.2009.11.008.

  26. Fulci V, Colombo T, Chiaretti S, Messina M, Citarella F, Tavolaro S, Guarini A, Foà R, Macino G. Characterization of B- and T-lineage acute lymphoblastic leukemia by integrated analysis of MicroRNA and mRNA expression profiles. Genes Chromosomes Cancer. 2009 Dec;48(12):1069-82. doi: 10.1002/gcc.20709.

  27. Carissimi C, Fulci V, Macino G. MicroRNAs: novel regulators of immunity. Autoimmun Rev. 2009 May;8(6):520-4. doi: 10.1016/j.autrev.2009.01.008.

  28. Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foà R, Schliwka J, Fuchs U, Novosel A, Müller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G, Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN, Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo JJ, Sander C, Zavolan M, Tuschl T. A mammalian microRNA expression atlas based on small RNA library sequencing. Cell. 2007 Jun 29;129(7):1401-14. doi: 10.1016/j.cell.2007.04.040. PMID: 17604727; PMCID: PMC2681231.

  29. Fulci V, Macino G. Quelling: post-transcriptional gene silencing guided by small RNAs in Neurospora crassa. Curr Opin Microbiol. 2007 Apr;10(2):199-203. doi: 10.1016/j.mib.2007.03.016. Epub 2007 Mar 28. PMID: 17395524.

  30. Fulci V, Chiaretti S, Goldoni M, Azzalin G, Carucci N, Tavolaro S, Castellano L, Magrelli A, Citarella F, Messina M, Maggio R, Peragine N, Santangelo S, Mauro FR, Landgraf P, Tuschl T, Weir DB, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Guarini A, Foà R, Macino G. Quantitative technologies establish a novel microRNA profile of chronic lymphocytic leukemia. Blood. 2007 Jun 1;109(11):4944-51. doi: 10.1182/blood-2006-12-062398. Epub 2007 Feb 27. PMID: 17327404.

  31. Franchi L, Fulci V, Macino G. Protein kinase C modulates light responses in Neurospora by regulating the blue light photoreceptor WC-1. Mol Microbiol. 2005 Apr;56(2):334-45. doi: 10.1111/j.1365-2958.2005.04545.x.